Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015892323.1_cds_XP_016447207.1_41989
CDS Infomation

[gene=LOC107772228] [db_xref=GeneID:107772228] [protein=putative UPF0481 protein At3g02645] [protein_id=XP_016447207.1] [location=complement(join(2778..4247,6768..6839))] [gbkey=CDS]
Sequence

ATGGCACATCATATTGAGATTACCCAAATGGATCATCAAATTCCACTTCTTGATCAAACT
TCTGTAAATGAGATAGAAGAAGGGAGGAAAGTGGATCATTTAATTGAGATAAGGGAAACA
AATGGTGAAGATCGATCAGGAATGACAACAAATAAACCTGCGAATCAAATCCTTGATGAA
ATATTTGCGGATATCAACGACTCATCTAGCAAATGTTGTACCATATTCAAAGTAAGTGTG
GGGTTGAGTGAATCAAATTCAGGTGCTTATGAGCCAAAGGTGATCTCCATTGGTCCTTAC
CATAAACACAATCCTAAATTTCGCTCCATGGAAAAGTACAAAGTGTGTTACCTGCAACGG
TTCCTCCGCAGGAAAGAGGGGATTGATGTGGAAAGTTGCATTAGAGAATTGGAGGATGAA
GCATTAAAGTGTTATGATGATATAGAAAACCTTGACAGGGATATTGTTGCCAAATTTTCA
AAAATATTGTTACTTGATGGTTGTTTTCTAGTTGAATACATCCGAGAGCGTTGTGGAATG
TGTCCAGAAGGAGAAGATTGGATTATCTCTGGAGGTTGCCTAGATAATCAAATACGTCGT
GACTTGTTGTTACTAGAAAACCAACTTGCTTTCTTTGTCCTCACAAAACTTCATCACATG
ACTAAAGATGAGGAAGATAAAATACCATTCATAAAAATGGTGAAGAGGACCTTTTTCCTT
GATTTACCGAAGATGACCCCTGCATCCTATCTTGAGAGTGAAGGTAATGCCGCAGAAATC
AAACATTTACTTCAAGTTGTACACATGTCATGTCACCCTTCAGATATTAAAACTACTAGC
CTTACGAATCCTAGCATGGAAACGGAACATTTCTGGAAAAGTTTATGTTGTAATCCTTTG
CGAATAATTAGGTCAAAAGATAAGCCAATAGATAAGGACCACCTAACGGGGCATAACGTC
ATGCCAAATGCAACGCAACTTTCCGAATATGGAGTTAGCTTCGTAAAAGTCGGATATATT
TATGATTACTTGGAGGAAGAAAACTACGGAGATAACACAAGTTTATTTGATATCAAATTT
GAAAACGGGCTAATAAAAATTCCTAGTTTTAAAGTCACTGATGATACGGAGACTCTCCTT
CGGAATCTGATAGCGTATGAGCAACAGTCGATTCATGTACATGGTCCTAGATATTTCAGT
GATTTTGCAATTTTCATGGATTATCTTATCGACTCGGAGAAAGATCTGAATTTGCTACGC
CGAAAAGGAATTATCAAGAATAGGATAGGGGAGGACAAAGAAATAGCTACCCTTTTTAAC
AAGATCGGGAAAGGAGTCTCCATTTCACATGAGGACTTCTATTACGAAGAAGAATGCAGA
AAATTGGTTCAACATTGTGAACAAACATGGAACCTAATGAAGGCAAGTTTGAAGCGCAAT
TATTTTAATAGTCTGTGGGTAGGAACTTCAACTGTGGCAGCTGGCATACTCCTCGTACTC
ACAGCTATGCAGACTGTTCTAGCTTTCACAGGTGGTATTTAA

Peptide Sequence

PEP ID

XP_016447207.1
PEP Infomation

PREDICTED: putative UPF0481 protein At3g02645 [Nicotiana tabacum]
Sequence

MAHHIEITQMDHQIPLLDQTSVNEIEEGRKVDHLIEIRETNGEDRSGMTTNKPANQILDE
IFADINDSSSKCCTIFKVSVGLSESNSGAYEPKVISIGPYHKHNPKFRSMEKYKVCYLQR
FLRRKEGIDVESCIRELEDEALKCYDDIENLDRDIVAKFSKILLLDGCFLVEYIRERCGM
CPEGEDWIISGGCLDNQIRRDLLLLENQLAFFVLTKLHHMTKDEEDKIPFIKMVKRTFFL
DLPKMTPASYLESEGNAAEIKHLLQVVHMSCHPSDIKTTSLTNPSMETEHFWKSLCCNPL
RIIRSKDKPIDKDHLTGHNVMPNATQLSEYGVSFVKVGYIYDYLEEENYGDNTSLFDIKF
ENGLIKIPSFKVTDDTETLLRNLIAYEQQSIHVHGPRYFSDFAIFMDYLIDSEKDLNLLR
RKGIIKNRIGEDKEIATLFNKIGKGVSISHEDFYYEEECRKLVQHCEQTWNLMKASLKRN
YFNSLWVGTSTVAAGILLVLTAMQTVLAFTGGI

Transcript Sequence

Gene sequence data has not been registered.